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UCSF BioRouter

An integrated research environment that connects commercial, institution-hosted, and local AI models in one interface, built for biomedical discovery.

Community

Join the BioRouter Slack

Open community for issue reporting, feature requests, and discussion. join.slack.com/t/ucsfbiorouter

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Institutional security

Run inference on UCSF-hosted Azure OpenAI or Amazon Bedrock, or fully local Ollama. Patient data and proprietary research stay in your institutional environment.

Connected agents

Plug in specialized AI agents over the Model Context Protocol. Query clinical databases, biomedical knowledge graphs, and the literature from one session.

Federated collaboration

Package any analysis as a shareable Workflow. Collaborate across institutions without moving the underlying data. The Workflow carries the instructions, not the records.

Multi-provider routing

Switch between Claude, GPT, Gemini, and more. Commercial, institution-hosted, and local providers all use the same interface.

Automation and scheduling

Automate repeat research tasks with Workflows. Schedule pipelines on cron: literature reviews, data pulls, and analyses run on their own.

Desktop and CLI

A desktop GUI for interactive exploration and a command-line interface for scripting and integration into existing bioinformatics pipelines.

UCSF Azure OpenAI
UCSF Amazon Bedrock
Anthropic Claude
OpenAI GPT
Google Gemini
Ollama (local)
OpenRouter
X.AI Grok
Custom endpoints